Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CMC4P56277 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.48□□□□□ -0.41
CMC4P56277 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.47□□□□□ -0.41
CMC4P56277 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.47□□□□□ -0.41
CMC4P56277 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.47□□□□□ -0.41
CMC4P56277 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.47□□□□□ -0.41
CMC4P56277 AC018845.2-201ENST00000568326 409 ntBASIC12.47□□□□□ -0.41
CMC4P56277 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.47□□□□□ -0.41
CMC4P56277 AL031055.1-201ENST00000606362 631 ntBASIC12.47□□□□□ -0.41
CMC4P56277 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.47□□□□□ -0.41
CMC4P56277 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.47□□□□□ -0.41
CMC4P56277 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 AC067930.6-201ENST00000623257 4947 ntBASIC12.47□□□□□ -0.41
CMC4P56277 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.47□□□□□ -0.41
CMC4P56277 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CMC4P56277 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CMC4P56277 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.46□□□□□ -0.41
CMC4P56277 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.46□□□□□ -0.41
CMC4P56277 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.46□□□□□ -0.41
CMC4P56277 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CMC4P56277 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.46□□□□□ -0.41
CMC4P56277 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.46□□□□□ -0.41
CMC4P56277 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.46□□□□□ -0.41
CMC4P56277 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.46□□□□□ -0.41
CMC4P56277 AC005829.1-201ENST00000570002 483 ntBASIC12.46□□□□□ -0.41
CMC4P56277 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.46□□□□□ -0.41
CMC4P56277 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CMC4P56277 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CMC4P56277 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CMC4P56277 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CMC4P56277 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CMC4P56277 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.46□□□□□ -0.42
CMC4P56277 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CMC4P56277 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CMC4P56277 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.46□□□□□ -0.42
CMC4P56277 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.46□□□□□ -0.42
CMC4P56277 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CMC4P56277 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 AC092068.3-201ENST00000587894 2016 ntBASIC12.45□□□□□ -0.42
CMC4P56277 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CMC4P56277 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CMC4P56277 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMC4P56277 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms