Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GPC3P51654 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC3P51654 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC3P51654 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
GPC3P51654 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 PMS2P4-201ENST00000412466 1052 ntBASIC18.47■□□□□ 0.55
GPC3P51654 AC005237.2-201ENST00000434368 219 ntBASIC18.47■□□□□ 0.55
GPC3P51654 SPCS2P4-201ENST00000436160 681 ntBASIC18.47■□□□□ 0.55
GPC3P51654 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 AC069335.1-201ENST00000489972 472 ntBASIC18.47■□□□□ 0.55
GPC3P51654 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
GPC3P51654 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
GPC3P51654 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
GPC3P51654 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
GPC3P51654 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.47■□□□□ 0.55
GPC3P51654 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 AC004449.1-201ENST00000564240 433 ntBASIC18.47■□□□□ 0.55
GPC3P51654 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 AC106028.4-201ENST00000614509 607 ntBASIC18.47■□□□□ 0.55
GPC3P51654 LINC00628-201ENST00000628516 1289 ntBASIC18.47■□□□□ 0.55
GPC3P51654 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GPC3P51654 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.47■□□□□ 0.55
GPC3P51654 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GPC3P51654 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.47■□□□□ 0.55
GPC3P51654 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC3P51654 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC3P51654 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.46■□□□□ 0.55
GPC3P51654 AC105020.1-201ENST00000435356 2205 ntBASIC18.46■□□□□ 0.55
GPC3P51654 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
GPC3P51654 AC009053.2-201ENST00000563701 2365 ntBASIC18.46■□□□□ 0.55
GPC3P51654 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.46■□□□□ 0.55
GPC3P51654 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GPC3P51654 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.46■□□□□ 0.55
GPC3P51654 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.46■□□□□ 0.55
GPC3P51654 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC3P51654 WASH6P-202ENST00000359512 1437 ntBASIC18.46■□□□□ 0.55
GPC3P51654 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GPC3P51654 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC3P51654 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.46■□□□□ 0.55
GPC3P51654 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GPC3P51654 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
GPC3P51654 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
GPC3P51654 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GPC3P51654 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
GPC3P51654 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC3P51654 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
GPC3P51654 FAM58DP-201ENST00000428076 619 ntBASIC18.45■□□□□ 0.54
GPC3P51654 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC3P51654 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC3P51654 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.45■□□□□ 0.54
GPC3P51654 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.45■□□□□ 0.54
GPC3P51654 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
GPC3P51654 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.45■□□□□ 0.54
GPC3P51654 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GPC3P51654 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GPC3P51654 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GPC3P51654 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GPC3P51654 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.44■□□□□ 0.54
GPC3P51654 AC005915.1-201ENST00000624912 2018 ntBASIC18.44■□□□□ 0.54
GPC3P51654 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms