Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.7□□□□□ -0.7
UBE2AP49459 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
UBE2AP49459 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2AP49459 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2AP49459 AL353593.2-201ENST00000602529 1483 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2AP49459 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.69□□□□□ -0.7
UBE2AP49459 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SIGLEC30P-201ENST00000455569 941 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 AC091607.1-201ENST00000490318 1060 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 KRT18P35-201ENST00000510488 1269 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.69□□□□□ -0.7
UBE2AP49459 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC10.69□□□□□ -0.7
UBE2AP49459 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 AC092119.3-201ENST00000612618 583 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 AC114341.1-201ENST00000618070 349 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC10.69□□□□□ -0.7
UBE2AP49459 AC018695.7-201ENST00000624587 2492 ntBASIC10.69□□□□□ -0.7
UBE2AP49459 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.69□□□□□ -0.7
UBE2AP49459 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
UBE2AP49459 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
UBE2AP49459 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
UBE2AP49459 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2AP49459 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 C8orf49-201ENST00000525043 1968 ntBASIC10.68□□□□□ -0.7
UBE2AP49459 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2AP49459 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.68□□□□□ -0.7
UBE2AP49459 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2AP49459 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
UBE2AP49459 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2AP49459 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.68□□□□□ -0.7
UBE2AP49459 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.68□□□□□ -0.7
UBE2AP49459 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
UBE2AP49459 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
UBE2AP49459 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms