Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC011840.4-201ENST00000578471 627 ntBASIC11.37□□□□□ -0.59
CXCL5P42830 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.37□□□□□ -0.59
CXCL5P42830 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 HLA-A-202ENST00000376806 1854 ntBASIC11.37□□□□□ -0.59
CXCL5P42830 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.37□□□□□ -0.59
CXCL5P42830 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CXCL5P42830 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 KRT8P10-201ENST00000450021 1447 ntBASIC11.36□□□□□ -0.59
CXCL5P42830 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
CXCL5P42830 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.36□□□□□ -0.59
CXCL5P42830 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.36□□□□□ -0.59
CXCL5P42830 YBX1P2-201ENST00000489612 999 ntBASIC11.36□□□□□ -0.59
CXCL5P42830 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.36□□□□□ -0.59
CXCL5P42830 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 AC009533.2-201ENST00000543664 586 ntBASIC11.36□□□□□ -0.59
CXCL5P42830 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.36□□□□□ -0.59
CXCL5P42830 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.36□□□□□ -0.59
CXCL5P42830 AL138831.2-201ENST00000606564 490 ntBASIC11.36□□□□□ -0.59
CXCL5P42830 AC011558.1-201ENST00000623459 338 ntBASIC11.36□□□□□ -0.59
CXCL5P42830 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
CXCL5P42830 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
CXCL5P42830 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 AC097376.2-205ENST00000610159 5334 ntBASIC11.36□□□□□ -0.59
CXCL5P42830 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
CXCL5P42830 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.36□□□□□ -0.59
CXCL5P42830 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms