Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SRD5A3P1-201ENST00000603021 949 ntBASIC20.85■□□□□ 0.93
RFC4P35249 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.85■□□□□ 0.93
RFC4P35249 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFC4P35249 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RFC4P35249 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RFC4P35249 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC4P35249 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.84■□□□□ 0.93
RFC4P35249 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RFC4P35249 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 AL354751.1-201ENST00000412768 1863 ntBASIC20.84■□□□□ 0.93
RFC4P35249 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC4P35249 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC4P35249 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC4P35249 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 MYCLP2-201ENST00000449268 967 ntBASIC20.84■□□□□ 0.93
RFC4P35249 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC4P35249 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 TPRX2P-201ENST00000535362 881 ntBASIC20.84■□□□□ 0.93
RFC4P35249 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC4P35249 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC4P35249 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC4P35249 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
RFC4P35249 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RFC4P35249 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RFC4P35249 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RFC4P35249 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.83■□□□□ 0.93
RFC4P35249 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RFC4P35249 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.83■□□□□ 0.93
RFC4P35249 AL033527.5-202ENST00000641632 1098 ntBASIC20.83■□□□□ 0.93
RFC4P35249 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC4P35249 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.83■□□□□ 0.92
RFC4P35249 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.83■□□□□ 0.92
RFC4P35249 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
RFC4P35249 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.83■□□□□ 0.92
RFC4P35249 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFC4P35249 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFC4P35249 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.82■□□□□ 0.92
RFC4P35249 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC4P35249 AC006277.1-201ENST00000624348 1610 ntBASIC20.82■□□□□ 0.92
RFC4P35249 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.82■□□□□ 0.92
RFC4P35249 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.82■□□□□ 0.92
RFC4P35249 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC4P35249 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.82■□□□□ 0.92
RFC4P35249 MEP1AP4-201ENST00000423244 1087 ntBASIC20.82■□□□□ 0.92
RFC4P35249 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
RFC4P35249 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC4P35249 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RFC4P35249 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.82■□□□□ 0.92
RFC4P35249 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.82■□□□□ 0.92
RFC4P35249 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.82■□□□□ 0.92
RFC4P35249 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC4P35249 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.82■□□□□ 0.92
RFC4P35249 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 AL512343.1-201ENST00000605837 169 ntBASIC20.82■□□□□ 0.92
RFC4P35249 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.82■□□□□ 0.92
RFC4P35249 AC004461.2-201ENST00000629517 803 ntBASIC20.82■□□□□ 0.92
RFC4P35249 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC4P35249 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RFC4P35249 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC4P35249 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.81■□□□□ 0.92
RFC4P35249 TUBB8P12-201ENST00000308911 1335 ntBASIC20.81■□□□□ 0.92
RFC4P35249 TUBB7P-202ENST00000428444 1305 ntBASIC20.81■□□□□ 0.92
RFC4P35249 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms