Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC26.33■■□□□ 1.81
CLIP1P30622 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC26.33■■□□□ 1.81
CLIP1P30622 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC26.33■■□□□ 1.81
CLIP1P30622 BAD-207ENST00000544785 525 ntTSL 3 BASIC26.33■■□□□ 1.81
CLIP1P30622 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLIP1P30622 AC140878.1-201ENST00000565277 250 ntBASIC26.33■■□□□ 1.81
CLIP1P30622 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC26.33■■□□□ 1.81
CLIP1P30622 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC26.33■■□□□ 1.81
CLIP1P30622 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC26.33■■□□□ 1.81
CLIP1P30622 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CLIP1P30622 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLIP1P30622 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 GCK-202ENST00000345378 2421 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLIP1P30622 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLIP1P30622 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CLIP1P30622 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CLIP1P30622 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CLIP1P30622 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
CLIP1P30622 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC26.32■■□□□ 1.8
CLIP1P30622 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CLIP1P30622 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC26.32■■□□□ 1.8
CLIP1P30622 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC26.32■■□□□ 1.8
CLIP1P30622 AC007967.4-201ENST00000614700 386 ntBASIC26.32■■□□□ 1.8
CLIP1P30622 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC26.32■■□□□ 1.8
CLIP1P30622 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC26.32■■□□□ 1.8
CLIP1P30622 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC26.32■■□□□ 1.8
CLIP1P30622 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
CLIP1P30622 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CLIP1P30622 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CLIP1P30622 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLIP1P30622 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CLIP1P30622 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC26.31■■□□□ 1.8
CLIP1P30622 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 MIR943-201ENST00000401286 94 ntBASIC26.31■■□□□ 1.8
CLIP1P30622 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.31■■□□□ 1.8
CLIP1P30622 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26.31■■□□□ 1.8
CLIP1P30622 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CLIP1P30622 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC26.31■■□□□ 1.8
CLIP1P30622 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC26.31■■□□□ 1.8
CLIP1P30622 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC26.31■■□□□ 1.8
CLIP1P30622 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CLIP1P30622 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CLIP1P30622 FZD10-202ENST00000539839 3282 ntBASIC26.31■■□□□ 1.8
CLIP1P30622 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CLIP1P30622 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC26.31■■□□□ 1.8
CLIP1P30622 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC26.31■■□□□ 1.8
CLIP1P30622 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
CLIP1P30622 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC26.31■■□□□ 1.8
CLIP1P30622 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC26.31■■□□□ 1.8
CLIP1P30622 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 TREML5P-201ENST00000421694 576 ntBASIC26.31■■□□□ 1.8
CLIP1P30622 AC092580.3-201ENST00000430932 139 ntBASIC26.31■■□□□ 1.8
CLIP1P30622 PNKD-204ENST00000436005 978 ntTSL 5 BASIC26.31■■□□□ 1.8
CLIP1P30622 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC26.31■■□□□ 1.8
CLIP1P30622 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 MIR4453-201ENST00000584019 89 ntBASIC26.31■■□□□ 1.8
CLIP1P30622 HFE2-206ENST00000634927 506 ntTSL 4 BASIC26.31■■□□□ 1.8
CLIP1P30622 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC26.31■■□□□ 1.8
CLIP1P30622 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLIP1P30622 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLIP1P30622 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CLIP1P30622 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLIP1P30622 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CLIP1P30622 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CLIP1P30622 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms