Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CHMP24386 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
CHMP24386 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP24386 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.73■□□□□ 0.11
CHMP24386 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP24386 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.73■□□□□ 0.11
CHMP24386 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.73■□□□□ 0.11
CHMP24386 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.73■□□□□ 0.11
CHMP24386 AC139887.3-201ENST00000568585 713 ntBASIC15.73■□□□□ 0.11
CHMP24386 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 AC008735.5-201ENST00000623544 497 ntBASIC15.73■□□□□ 0.11
CHMP24386 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CHMP24386 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP24386 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP24386 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP24386 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP24386 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 AC148477.5-201ENST00000625164 1645 ntBASIC15.72■□□□□ 0.11
CHMP24386 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 NCF1C-201ENST00000438382 1427 ntBASIC15.72■□□□□ 0.11
CHMP24386 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 AL022342.1-201ENST00000400363 863 ntBASIC15.72■□□□□ 0.11
CHMP24386 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP24386 AL590627.1-203ENST00000421194 1026 ntBASIC15.72■□□□□ 0.11
CHMP24386 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.72■□□□□ 0.11
CHMP24386 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CHMP24386 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.72■□□□□ 0.11
CHMP24386 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP24386 AC006557.2-201ENST00000592985 1240 ntBASIC15.72■□□□□ 0.11
CHMP24386 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 AC004817.3-201ENST00000602957 2129 ntBASIC15.72■□□□□ 0.11
CHMP24386 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms