Protein–RNA interactions for Protein: P23368

ME2, NAD-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME2P23368 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ME2P23368 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.24■□□□□ 0.19
ME2P23368 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ME2P23368 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 DBET-201ENST00000630918 3363 ntBASIC16.24■□□□□ 0.19
ME2P23368 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.24■□□□□ 0.19
ME2P23368 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ME2P23368 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.23■□□□□ 0.19
ME2P23368 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ME2P23368 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ME2P23368 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.23■□□□□ 0.19
ME2P23368 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.23■□□□□ 0.19
ME2P23368 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
ME2P23368 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.23■□□□□ 0.19
ME2P23368 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.23■□□□□ 0.19
ME2P23368 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ME2P23368 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ME2P23368 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ME2P23368 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.22■□□□□ 0.19
ME2P23368 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.22■□□□□ 0.19
ME2P23368 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.22■□□□□ 0.19
ME2P23368 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ME2P23368 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.22■□□□□ 0.19
ME2P23368 ATP5G2P1-201ENST00000433580 426 ntBASIC16.22■□□□□ 0.19
ME2P23368 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.22■□□□□ 0.19
ME2P23368 HLA-J-202ENST00000469281 1241 ntBASIC16.22■□□□□ 0.19
ME2P23368 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.22■□□□□ 0.19
ME2P23368 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.22■□□□□ 0.19
ME2P23368 AC111152.3-201ENST00000569699 673 ntBASIC16.22■□□□□ 0.19
ME2P23368 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.22■□□□□ 0.19
ME2P23368 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.22■□□□□ 0.19
ME2P23368 AP002414.4-201ENST00000589764 1148 ntBASIC16.22■□□□□ 0.19
ME2P23368 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ME2P23368 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.22■□□□□ 0.19
ME2P23368 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms