Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ATF1P18846 KRT17P6-201ENST00000453795 1220 ntBASIC14.77□□□□□ -0.05
ATF1P18846 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 AC096582.2-201ENST00000510860 516 ntBASIC14.77□□□□□ -0.05
ATF1P18846 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.77□□□□□ -0.05
ATF1P18846 TPSP2-201ENST00000561760 610 ntBASIC14.77□□□□□ -0.05
ATF1P18846 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.77□□□□□ -0.05
ATF1P18846 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.77□□□□□ -0.05
ATF1P18846 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ATF1P18846 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ATF1P18846 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
ATF1P18846 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.77□□□□□ -0.05
ATF1P18846 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
ATF1P18846 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ATF1P18846 AC126177.1-201ENST00000547829 2218 ntBASIC14.77□□□□□ -0.05
ATF1P18846 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.77□□□□□ -0.05
ATF1P18846 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.77□□□□□ -0.05
ATF1P18846 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ATF1P18846 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ATF1P18846 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.76□□□□□ -0.05
ATF1P18846 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ATF1P18846 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.76□□□□□ -0.05
ATF1P18846 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ATF1P18846 RCN1P2-201ENST00000398357 915 ntBASIC14.76□□□□□ -0.05
ATF1P18846 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.76□□□□□ -0.05
ATF1P18846 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ATF1P18846 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.76□□□□□ -0.05
ATF1P18846 SIGLEC30P-201ENST00000455569 941 ntBASIC14.76□□□□□ -0.05
ATF1P18846 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.76□□□□□ -0.05
ATF1P18846 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.76□□□□□ -0.05
ATF1P18846 HLA-J-202ENST00000469281 1241 ntBASIC14.76□□□□□ -0.05
ATF1P18846 TOB2P1-201ENST00000469761 992 ntBASIC14.76□□□□□ -0.05
ATF1P18846 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.76□□□□□ -0.05
ATF1P18846 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.76□□□□□ -0.05
ATF1P18846 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.76□□□□□ -0.05
ATF1P18846 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.76□□□□□ -0.05
ATF1P18846 AP002414.4-201ENST00000589764 1148 ntBASIC14.76□□□□□ -0.05
ATF1P18846 BNIP3P18-201ENST00000593976 575 ntBASIC14.76□□□□□ -0.05
ATF1P18846 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.76□□□□□ -0.05
ATF1P18846 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 PMPCAP1-201ENST00000508114 1576 ntBASIC14.76□□□□□ -0.05
ATF1P18846 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.76□□□□□ -0.05
ATF1P18846 NSUN5P1-202ENST00000421140 1535 ntBASIC14.76□□□□□ -0.05
ATF1P18846 NSUN5P2-203ENST00000457352 1529 ntBASIC14.76□□□□□ -0.05
ATF1P18846 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ATF1P18846 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATF1P18846 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.75□□□□□ -0.05
ATF1P18846 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 AL596087.1-201ENST00000400979 1969 ntBASIC14.75□□□□□ -0.05
ATF1P18846 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.75□□□□□ -0.05
ATF1P18846 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.75□□□□□ -0.05
ATF1P18846 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
ATF1P18846 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATF1P18846 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.75□□□□□ -0.05
ATF1P18846 PCED1CP-201ENST00000419887 785 ntBASIC14.75□□□□□ -0.05
ATF1P18846 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.75□□□□□ -0.05
ATF1P18846 AP002383.4-201ENST00000442518 975 ntBASIC14.75□□□□□ -0.05
ATF1P18846 LINC00265-3P-201ENST00000447588 903 ntBASIC14.75□□□□□ -0.05
ATF1P18846 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms