Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP1A3P13637 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP1A3P13637 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP1A3P13637 BX005266.1-201ENST00000473402 457 ntBASIC18.52■□□□□ 0.56
ATP1A3P13637 AP000867.3-201ENST00000524675 377 ntBASIC18.52■□□□□ 0.56
ATP1A3P13637 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
ATP1A3P13637 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP1A3P13637 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP1A3P13637 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1A3P13637 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP1A3P13637 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ATP1A3P13637 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP1A3P13637 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP1A3P13637 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP1A3P13637 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP1A3P13637 AC144831.1-201ENST00000573312 2656 ntBASIC18.52■□□□□ 0.55
ATP1A3P13637 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP1A3P13637 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP1A3P13637 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP1A3P13637 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP1A3P13637 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP1A3P13637 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP1A3P13637 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ATP1A3P13637 AP001269.4-201ENST00000609611 512 ntBASIC18.51■□□□□ 0.55
ATP1A3P13637 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP1A3P13637 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP1A3P13637 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP1A3P13637 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP1A3P13637 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 AC092384.3-202ENST00000564646 2873 ntBASIC18.51■□□□□ 0.55
ATP1A3P13637 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP1A3P13637 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP1A3P13637 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
ATP1A3P13637 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ATP1A3P13637 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.5■□□□□ 0.55
ATP1A3P13637 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP1A3P13637 NUS1P2-201ENST00000417358 873 ntBASIC18.5■□□□□ 0.55
ATP1A3P13637 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP1A3P13637 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP1A3P13637 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP1A3P13637 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.5■□□□□ 0.55
ATP1A3P13637 AC099336.1-202ENST00000602961 463 ntBASIC18.5■□□□□ 0.55
ATP1A3P13637 NPAP1P7-201ENST00000613027 823 ntBASIC18.5■□□□□ 0.55
ATP1A3P13637 DBET-201ENST00000630918 3363 ntBASIC18.5■□□□□ 0.55
ATP1A3P13637 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP1A3P13637 TOP3BP1-201ENST00000420768 1380 ntBASIC18.5■□□□□ 0.55
ATP1A3P13637 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP1A3P13637 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms