Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6BP04259 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT6BP04259 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6BP04259 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6BP04259 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT6BP04259 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 AC068418.2-201ENST00000577309 3703 ntBASIC16.3■□□□□ 0.2
KRT6BP04259 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6BP04259 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6BP04259 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
KRT6BP04259 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 DOC2GP-204ENST00000639052 2548 ntBASIC16.29■□□□□ 0.2
KRT6BP04259 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6BP04259 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6BP04259 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
KRT6BP04259 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
KRT6BP04259 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT6BP04259 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6BP04259 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.29■□□□□ 0.2
KRT6BP04259 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6BP04259 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6BP04259 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT6BP04259 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 REXO1L6P-202ENST00000619970 1078 ntBASIC16.29■□□□□ 0.2
KRT6BP04259 AC004706.3-202ENST00000621574 984 ntBASIC16.29■□□□□ 0.2
KRT6BP04259 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.29■□□□□ 0.2
KRT6BP04259 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
KRT6BP04259 AC006449.5-201ENST00000610658 2098 ntBASIC16.29■□□□□ 0.2
KRT6BP04259 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
KRT6BP04259 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT6BP04259 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT6BP04259 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT6BP04259 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT6BP04259 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 PAWRP1-201ENST00000451083 565 ntBASIC16.28■□□□□ 0.2
KRT6BP04259 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT6BP04259 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT6BP04259 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.28■□□□□ 0.2
KRT6BP04259 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT6BP04259 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
KRT6BP04259 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT6BP04259 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
KRT6BP04259 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT6BP04259 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms