Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTNP04004 AC107890.1-201ENST00000422478 521 ntBASIC18.3■□□□□ 0.52
VTNP04004 AC142381.1-201ENST00000426099 345 ntBASIC18.3■□□□□ 0.52
VTNP04004 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.3■□□□□ 0.52
VTNP04004 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.3■□□□□ 0.52
VTNP04004 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.3■□□□□ 0.52
VTNP04004 AL391256.1-201ENST00000443260 1855 ntBASIC18.3■□□□□ 0.52
VTNP04004 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.3■□□□□ 0.52
VTNP04004 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTNP04004 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.3■□□□□ 0.52
VTNP04004 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VTNP04004 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTNP04004 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VTNP04004 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.29■□□□□ 0.52
VTNP04004 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.29■□□□□ 0.52
VTNP04004 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.29■□□□□ 0.52
VTNP04004 SPDYE7P-202ENST00000420373 878 ntBASIC18.29■□□□□ 0.52
VTNP04004 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.29■□□□□ 0.52
VTNP04004 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.29■□□□□ 0.52
VTNP04004 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.29■□□□□ 0.52
VTNP04004 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.29■□□□□ 0.52
VTNP04004 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.29■□□□□ 0.52
VTNP04004 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.29■□□□□ 0.52
VTNP04004 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.29■□□□□ 0.52
VTNP04004 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VTNP04004 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VTNP04004 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.28■□□□□ 0.52
VTNP04004 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.28■□□□□ 0.52
VTNP04004 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.28■□□□□ 0.52
VTNP04004 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.28■□□□□ 0.52
VTNP04004 TREML5P-201ENST00000421694 576 ntBASIC18.28■□□□□ 0.52
VTNP04004 AC055876.3-201ENST00000431496 288 ntBASIC18.28■□□□□ 0.52
VTNP04004 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.28■□□□□ 0.52
VTNP04004 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.28■□□□□ 0.52
VTNP04004 AC105233.2-201ENST00000523697 349 ntBASIC18.28■□□□□ 0.52
VTNP04004 AF228730.5-201ENST00000530288 346 ntBASIC18.28■□□□□ 0.52
VTNP04004 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.28■□□□□ 0.52
VTNP04004 AC138649.4-201ENST00000612222 287 ntBASIC18.28■□□□□ 0.52
VTNP04004 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 KRT8P39-201ENST00000396270 1433 ntBASIC18.28■□□□□ 0.52
VTNP04004 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 FO538757.1-201ENST00000623083 1397 ntBASIC18.28■□□□□ 0.52
VTNP04004 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
VTNP04004 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VTNP04004 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
VTNP04004 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.28■□□□□ 0.52
VTNP04004 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VTNP04004 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
VTNP04004 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTNP04004 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTNP04004 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTNP04004 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VTNP04004 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms