Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 Z83851.2-201ENST00000609564 659 ntBASIC19.38■□□□□ 0.69
CTDNEP1O95476 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 MTHFR-217ENST00000641820 1569 ntBASIC19.38■□□□□ 0.69
CTDNEP1O95476 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 KRT18P2-201ENST00000447938 1258 ntBASIC19.37■□□□□ 0.69
CTDNEP1O95476 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 AC093909.1-201ENST00000504731 1122 ntBASIC19.37■□□□□ 0.69
CTDNEP1O95476 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 AC145285.3-201ENST00000564603 959 ntBASIC19.37■□□□□ 0.69
CTDNEP1O95476 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 AP001350.2-201ENST00000625104 1094 ntBASIC19.37■□□□□ 0.69
CTDNEP1O95476 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTDNEP1O95476 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTDNEP1O95476 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 RNU1-129P-201ENST00000384064 167 ntBASIC19.36■□□□□ 0.69
CTDNEP1O95476 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CRYGEP-201ENST00000412192 528 ntBASIC19.36■□□□□ 0.69
CTDNEP1O95476 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.36■□□□□ 0.69
CTDNEP1O95476 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 U1.21-201ENST00000580816 167 ntBASIC19.36■□□□□ 0.69
CTDNEP1O95476 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 PCGF3-213ENST00000620529 1899 ntBASIC19.36■□□□□ 0.69
CTDNEP1O95476 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.36■□□□□ 0.69
CTDNEP1O95476 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTDNEP1O95476 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 AC104109.2-201ENST00000602919 1418 ntBASIC19.35■□□□□ 0.69
CTDNEP1O95476 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 AL513480.1-201ENST00000451731 511 ntBASIC19.35■□□□□ 0.69
CTDNEP1O95476 AC096734.2-201ENST00000562054 433 ntBASIC19.35■□□□□ 0.69
CTDNEP1O95476 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTDNEP1O95476 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.35■□□□□ 0.69
CTDNEP1O95476 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms