Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP1O94782 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
USP1O94782 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.02■□□□□ 0.32
USP1O94782 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
USP1O94782 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.02■□□□□ 0.32
USP1O94782 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.02■□□□□ 0.32
USP1O94782 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
USP1O94782 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.02■□□□□ 0.32
USP1O94782 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.02■□□□□ 0.32
USP1O94782 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.02■□□□□ 0.32
USP1O94782 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 TSPY19P-201ENST00000418461 509 ntBASIC17.02■□□□□ 0.32
USP1O94782 TSPY18P-201ENST00000441642 509 ntBASIC17.02■□□□□ 0.32
USP1O94782 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.02■□□□□ 0.32
USP1O94782 PAWRP1-201ENST00000451083 565 ntBASIC17.02■□□□□ 0.32
USP1O94782 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.02■□□□□ 0.32
USP1O94782 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.02■□□□□ 0.32
USP1O94782 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP1O94782 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.02■□□□□ 0.32
USP1O94782 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.02■□□□□ 0.32
USP1O94782 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.02■□□□□ 0.31
USP1O94782 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
USP1O94782 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.02■□□□□ 0.31
USP1O94782 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.02■□□□□ 0.31
USP1O94782 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP1O94782 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP1O94782 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP1O94782 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP1O94782 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.02■□□□□ 0.31
USP1O94782 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.02■□□□□ 0.31
USP1O94782 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP1O94782 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP1O94782 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 FGFR3P6-201ENST00000457012 610 ntBASIC17.01■□□□□ 0.31
USP1O94782 AC139887.3-201ENST00000568585 713 ntBASIC17.01■□□□□ 0.31
USP1O94782 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.01■□□□□ 0.31
USP1O94782 CYP2T1P-202ENST00000641596 2535 ntBASIC17.01■□□□□ 0.31
USP1O94782 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 AC026691.1-201ENST00000602502 2017 ntBASIC17.01■□□□□ 0.31
USP1O94782 TOP3BP1-201ENST00000420768 1380 ntBASIC17.01■□□□□ 0.31
USP1O94782 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP1O94782 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
USP1O94782 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
USP1O94782 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17■□□□□ 0.31
USP1O94782 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP1O94782 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms