Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.21■□□□□ 0.67
GADD45BO75293 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 AL353135.1-201ENST00000606729 504 ntBASIC19.21■□□□□ 0.67
GADD45BO75293 AC073592.4-201ENST00000623827 446 ntBASIC19.21■□□□□ 0.67
GADD45BO75293 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.21■□□□□ 0.67
GADD45BO75293 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GADD45BO75293 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GADD45BO75293 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
GADD45BO75293 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GADD45BO75293 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
GADD45BO75293 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.2■□□□□ 0.66
GADD45BO75293 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.2■□□□□ 0.66
GADD45BO75293 REXO1L8P-201ENST00000604378 1897 ntBASIC19.2■□□□□ 0.66
GADD45BO75293 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.2■□□□□ 0.66
GADD45BO75293 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
GADD45BO75293 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.2■□□□□ 0.66
GADD45BO75293 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.2■□□□□ 0.66
GADD45BO75293 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.2■□□□□ 0.66
GADD45BO75293 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GADD45BO75293 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.2■□□□□ 0.66
GADD45BO75293 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GADD45BO75293 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GADD45BO75293 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.2■□□□□ 0.66
GADD45BO75293 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GADD45BO75293 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.19■□□□□ 0.66
GADD45BO75293 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.19■□□□□ 0.66
GADD45BO75293 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 AC079776.2-201ENST00000641154 1609 ntBASIC19.19■□□□□ 0.66
GADD45BO75293 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 DRAXINP1-201ENST00000437611 948 ntBASIC19.19■□□□□ 0.66
GADD45BO75293 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GADD45BO75293 AC073347.1-201ENST00000421633 2643 ntBASIC19.19■□□□□ 0.66
GADD45BO75293 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GADD45BO75293 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.19■□□□□ 0.66
GADD45BO75293 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
GADD45BO75293 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GADD45BO75293 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.18■□□□□ 0.66
GADD45BO75293 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.18■□□□□ 0.66
GADD45BO75293 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.18■□□□□ 0.66
GADD45BO75293 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.18■□□□□ 0.66
GADD45BO75293 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.18■□□□□ 0.66
GADD45BO75293 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
GADD45BO75293 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.18■□□□□ 0.66
GADD45BO75293 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GADD45BO75293 TSSC2-201ENST00000450217 709 ntBASIC19.18■□□□□ 0.66
GADD45BO75293 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms