Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.49■□□□□ 0.07
IDH3BO43837 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IDH3BO43837 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.49■□□□□ 0.07
IDH3BO43837 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.49■□□□□ 0.07
IDH3BO43837 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.49■□□□□ 0.07
IDH3BO43837 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IDH3BO43837 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
IDH3BO43837 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
IDH3BO43837 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.49■□□□□ 0.07
IDH3BO43837 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
IDH3BO43837 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.49■□□□□ 0.07
IDH3BO43837 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 AC104640.1-201ENST00000562617 2109 ntBASIC15.49■□□□□ 0.07
IDH3BO43837 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IDH3BO43837 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IDH3BO43837 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.48■□□□□ 0.07
IDH3BO43837 AL513523.2-202ENST00000427283 2040 ntBASIC15.48■□□□□ 0.07
IDH3BO43837 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.48■□□□□ 0.07
IDH3BO43837 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.48■□□□□ 0.07
IDH3BO43837 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.48■□□□□ 0.07
IDH3BO43837 KLF4P1-201ENST00000412782 1185 ntBASIC15.48■□□□□ 0.07
IDH3BO43837 AP002490.2-201ENST00000524791 560 ntBASIC15.48■□□□□ 0.07
IDH3BO43837 RN7SL850P-201ENST00000579959 291 ntBASIC15.48■□□□□ 0.07
IDH3BO43837 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
IDH3BO43837 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.48■□□□□ 0.07
IDH3BO43837 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.48■□□□□ 0.07
IDH3BO43837 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
IDH3BO43837 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IDH3BO43837 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.47■□□□□ 0.07
IDH3BO43837 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.47■□□□□ 0.07
IDH3BO43837 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.47■□□□□ 0.07
IDH3BO43837 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IDH3BO43837 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IDH3BO43837 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.47■□□□□ 0.07
IDH3BO43837 AC006449.5-201ENST00000610658 2098 ntBASIC15.47■□□□□ 0.07
IDH3BO43837 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
IDH3BO43837 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IDH3BO43837 RCN1P1-201ENST00000400413 996 ntBASIC15.47■□□□□ 0.07
IDH3BO43837 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.47■□□□□ 0.07
IDH3BO43837 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.47■□□□□ 0.07
IDH3BO43837 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.47■□□□□ 0.07
IDH3BO43837 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IDH3BO43837 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
IDH3BO43837 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.47■□□□□ 0.07
IDH3BO43837 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.47■□□□□ 0.07
IDH3BO43837 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IDH3BO43837 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms