Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.76■□□□□ 0.91
SRGAP3O43295 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 CEND1P1-201ENST00000451006 455 ntBASIC20.76■□□□□ 0.91
SRGAP3O43295 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
SRGAP3O43295 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.76■□□□□ 0.91
SRGAP3O43295 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SRGAP3O43295 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SRGAP3O43295 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.76■□□□□ 0.91
SRGAP3O43295 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.76■□□□□ 0.91
SRGAP3O43295 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SRGAP3O43295 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.75■□□□□ 0.91
SRGAP3O43295 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SRGAP3O43295 AL355306.1-201ENST00000415580 579 ntBASIC20.75■□□□□ 0.91
SRGAP3O43295 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.75■□□□□ 0.91
SRGAP3O43295 ADH5P3-201ENST00000433842 1137 ntBASIC20.75■□□□□ 0.91
SRGAP3O43295 ACTG1P14-201ENST00000446382 1122 ntBASIC20.75■□□□□ 0.91
SRGAP3O43295 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.75■□□□□ 0.91
SRGAP3O43295 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.75■□□□□ 0.91
SRGAP3O43295 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 AC021097.1-201ENST00000607902 574 ntBASIC20.75■□□□□ 0.91
SRGAP3O43295 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.75■□□□□ 0.91
SRGAP3O43295 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.75■□□□□ 0.91
SRGAP3O43295 PRORSD1P-202ENST00000563365 2154 ntBASIC20.75■□□□□ 0.91
SRGAP3O43295 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.75■□□□□ 0.91
SRGAP3O43295 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRGAP3O43295 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SRGAP3O43295 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.74■□□□□ 0.91
SRGAP3O43295 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SRGAP3O43295 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.74■□□□□ 0.91
SRGAP3O43295 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.74■□□□□ 0.91
SRGAP3O43295 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.74■□□□□ 0.91
SRGAP3O43295 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.74■□□□□ 0.91
SRGAP3O43295 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.74■□□□□ 0.91
SRGAP3O43295 HLA-J-202ENST00000469281 1241 ntBASIC20.74■□□□□ 0.91
SRGAP3O43295 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.74■□□□□ 0.91
SRGAP3O43295 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SRGAP3O43295 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.74■□□□□ 0.91
SRGAP3O43295 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SRGAP3O43295 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SRGAP3O43295 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 AC139530.3-201ENST00000620344 690 ntBASIC20.74■□□□□ 0.91
SRGAP3O43295 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 AL031731.1-201ENST00000642131 2094 ntBASIC20.74■□□□□ 0.91
SRGAP3O43295 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRGAP3O43295 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms