Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PER1O15534 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 GPS2P2-201ENST00000430745 888 ntBASIC22.57■■□□□ 1.2
PER1O15534 SPDYE11-202ENST00000450699 704 ntBASIC22.57■■□□□ 1.2
PER1O15534 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 RN7SL589P-201ENST00000481268 310 ntBASIC22.57■■□□□ 1.2
PER1O15534 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
PER1O15534 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.57■■□□□ 1.2
PER1O15534 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.57■■□□□ 1.2
PER1O15534 SPDYE9P-201ENST00000570642 692 ntBASIC22.57■■□□□ 1.2
PER1O15534 AC027307.2-201ENST00000591252 911 ntBASIC22.57■■□□□ 1.2
PER1O15534 SPDYE10P-202ENST00000612005 668 ntBASIC22.57■■□□□ 1.2
PER1O15534 SPDYE8P-202ENST00000612377 668 ntBASIC22.57■■□□□ 1.2
PER1O15534 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PER1O15534 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PER1O15534 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC22.57■■□□□ 1.2
PER1O15534 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.57■■□□□ 1.2
PER1O15534 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC22.56■■□□□ 1.2
PER1O15534 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
PER1O15534 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 AL118508.1-201ENST00000613502 2345 ntBASIC22.56■■□□□ 1.2
PER1O15534 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 TIMM8BP1-201ENST00000452384 211 ntBASIC22.56■■□□□ 1.2
PER1O15534 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.56■■□□□ 1.2
PER1O15534 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
PER1O15534 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC22.56■■□□□ 1.2
PER1O15534 AP000842.3-202ENST00000569238 1080 ntBASIC22.56■■□□□ 1.2
PER1O15534 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 AP001160.2-201ENST00000596071 487 ntBASIC22.56■■□□□ 1.2
PER1O15534 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC22.56■■□□□ 1.2
PER1O15534 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER1O15534 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC22.56■■□□□ 1.2
PER1O15534 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PER1O15534 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PER1O15534 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.55■■□□□ 1.2
PER1O15534 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC22.55■■□□□ 1.2
PER1O15534 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC22.55■■□□□ 1.2
PER1O15534 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PER1O15534 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC22.55■■□□□ 1.2
PER1O15534 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms