Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 HLA-J-202ENST00000469281 1241 ntBASIC20.07■□□□□ 0.8
SEMA3EO15041 AC098859.1-201ENST00000502915 1238 ntBASIC20.07■□□□□ 0.8
SEMA3EO15041 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.07■□□□□ 0.8
SEMA3EO15041 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.07■□□□□ 0.8
SEMA3EO15041 AC092364.2-202ENST00000597012 1073 ntBASIC20.07■□□□□ 0.8
SEMA3EO15041 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.07■□□□□ 0.8
SEMA3EO15041 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SEMA3EO15041 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
SEMA3EO15041 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEMA3EO15041 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.07■□□□□ 0.8
SEMA3EO15041 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.06■□□□□ 0.8
SEMA3EO15041 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.06■□□□□ 0.8
SEMA3EO15041 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.06■□□□□ 0.8
SEMA3EO15041 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 SPTSSB-204ENST00000617024 1292 ntBASIC20.06■□□□□ 0.8
SEMA3EO15041 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.06■□□□□ 0.8
SEMA3EO15041 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.06■□□□□ 0.8
SEMA3EO15041 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEMA3EO15041 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SEMA3EO15041 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA3EO15041 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.05■□□□□ 0.8
SEMA3EO15041 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.05■□□□□ 0.8
SEMA3EO15041 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.05■□□□□ 0.8
SEMA3EO15041 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 AC069120.2-201ENST00000524091 540 ntBASIC20.05■□□□□ 0.8
SEMA3EO15041 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.05■□□□□ 0.8
SEMA3EO15041 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.05■□□□□ 0.8
SEMA3EO15041 MIR4453-201ENST00000584019 89 ntBASIC20.05■□□□□ 0.8
SEMA3EO15041 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.05■□□□□ 0.8
SEMA3EO15041 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA3EO15041 AC007967.4-201ENST00000614700 386 ntBASIC20.05■□□□□ 0.8
SEMA3EO15041 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SEMA3EO15041 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.05■□□□□ 0.8
SEMA3EO15041 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 PRORSD1P-202ENST00000563365 2154 ntBASIC20.05■□□□□ 0.8
SEMA3EO15041 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.05■□□□□ 0.8
SEMA3EO15041 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA3EO15041 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SEMA3EO15041 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.05■□□□□ 0.8
SEMA3EO15041 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SEMA3EO15041 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SEMA3EO15041 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SEMA3EO15041 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SEMA3EO15041 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.04■□□□□ 0.8
SEMA3EO15041 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA3EO15041 BASP1P1-201ENST00000430708 665 ntBASIC20.04■□□□□ 0.8
SEMA3EO15041 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.04■□□□□ 0.8
SEMA3EO15041 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.04■□□□□ 0.8
SEMA3EO15041 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.04■□□□□ 0.8
SEMA3EO15041 LINC02084-201ENST00000606069 1096 ntBASIC20.04■□□□□ 0.8
SEMA3EO15041 AJ011932.1-201ENST00000621707 465 ntBASIC20.04■□□□□ 0.8
SEMA3EO15041 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SEMA3EO15041 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEMA3EO15041 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms