Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CASQ2O14958 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CASQ2O14958 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CASQ2O14958 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CASQ2O14958 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CASQ2O14958 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CASQ2O14958 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CASQ2O14958 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.97■□□□□ 0.15
CASQ2O14958 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.97■□□□□ 0.15
CASQ2O14958 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.97■□□□□ 0.15
CASQ2O14958 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CASQ2O14958 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CASQ2O14958 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASQ2O14958 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 AC023157.3-201ENST00000619086 2088 ntBASIC15.96■□□□□ 0.15
CASQ2O14958 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 COX5BP2-201ENST00000392354 334 ntBASIC15.96■□□□□ 0.15
CASQ2O14958 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.96■□□□□ 0.15
CASQ2O14958 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.96■□□□□ 0.15
CASQ2O14958 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.96■□□□□ 0.15
CASQ2O14958 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.96■□□□□ 0.15
CASQ2O14958 AC019129.2-201ENST00000609837 1235 ntBASIC15.96■□□□□ 0.15
CASQ2O14958 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CASQ2O14958 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CASQ2O14958 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CASQ2O14958 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASQ2O14958 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CASQ2O14958 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
CASQ2O14958 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CASQ2O14958 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.96■□□□□ 0.14
CASQ2O14958 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CASQ2O14958 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.96■□□□□ 0.14
CASQ2O14958 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CASQ2O14958 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CASQ2O14958 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
CASQ2O14958 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CASQ2O14958 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.95■□□□□ 0.14
CASQ2O14958 CRYGFP-201ENST00000418459 633 ntBASIC15.95■□□□□ 0.14
CASQ2O14958 SLC25A1P2-201ENST00000430693 912 ntBASIC15.95■□□□□ 0.14
CASQ2O14958 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CASQ2O14958 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.95■□□□□ 0.14
CASQ2O14958 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.95■□□□□ 0.14
CASQ2O14958 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASQ2O14958 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
CASQ2O14958 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms