Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH17O14917 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 RPSAP43-201ENST00000402237 625 ntBASIC16.05■□□□□ 0.16
PCDH17O14917 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 MCCD1P2-201ENST00000423228 335 ntBASIC16.05■□□□□ 0.16
PCDH17O14917 GPX1P2-201ENST00000429271 606 ntBASIC16.05■□□□□ 0.16
PCDH17O14917 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH17O14917 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH17O14917 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH17O14917 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDH17O14917 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH17O14917 AC010327.4-202ENST00000591484 748 ntBASIC16.05■□□□□ 0.16
PCDH17O14917 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDH17O14917 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH17O14917 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDH17O14917 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDH17O14917 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDH17O14917 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH17O14917 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PCDH17O14917 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH17O14917 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDH17O14917 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH17O14917 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 YBX2P1-201ENST00000394192 760 ntBASIC16.04■□□□□ 0.16
PCDH17O14917 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH17O14917 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDH17O14917 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDH17O14917 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDH17O14917 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PCDH17O14917 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDH17O14917 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDH17O14917 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDH17O14917 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 AL603756.1-201ENST00000606511 2163 ntBASIC16.03■□□□□ 0.16
PCDH17O14917 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDH17O14917 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PCDH17O14917 RHOQP3-201ENST00000437982 621 ntBASIC16.03■□□□□ 0.16
PCDH17O14917 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDH17O14917 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDH17O14917 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PCDH17O14917 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms