Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 AC022616.7-201ENST00000525383 220 ntBASIC17.47■□□□□ 0.39
CCDC188H7C350 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC188H7C350 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC188H7C350 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 TOP3BP1-201ENST00000420768 1380 ntBASIC17.47■□□□□ 0.39
CCDC188H7C350 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC188H7C350 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC188H7C350 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC188H7C350 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC188H7C350 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC188H7C350 LINC01238-205ENST00000567549 1107 ntBASIC17.46■□□□□ 0.39
CCDC188H7C350 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.46■□□□□ 0.39
CCDC188H7C350 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC188H7C350 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 AC073592.4-201ENST00000623827 446 ntBASIC17.46■□□□□ 0.39
CCDC188H7C350 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC188H7C350 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC188H7C350 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC188H7C350 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 AL512652.2-201ENST00000625156 1716 ntBASIC17.46■□□□□ 0.39
CCDC188H7C350 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC188H7C350 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC188H7C350 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CCDC188H7C350 AL590787.1-201ENST00000568856 1315 ntBASIC17.46■□□□□ 0.38
CCDC188H7C350 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC188H7C350 AC010491.1-201ENST00000563101 2797 ntBASIC17.45■□□□□ 0.38
CCDC188H7C350 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC188H7C350 AL513477.1-201ENST00000602865 2407 ntBASIC17.45■□□□□ 0.38
CCDC188H7C350 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC188H7C350 AC093827.2-201ENST00000512654 315 ntBASIC17.45■□□□□ 0.38
CCDC188H7C350 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC188H7C350 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC188H7C350 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC188H7C350 AL121672.3-201ENST00000608644 468 ntBASIC17.45■□□□□ 0.38
CCDC188H7C350 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC188H7C350 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC188H7C350 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC188H7C350 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC188H7C350 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC188H7C350 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC188H7C350 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.45■□□□□ 0.38
CCDC188H7C350 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 AL031731.1-201ENST00000642131 2094 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms