Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC040169.1-201ENST00000565382 521 ntBASIC17.06■□□□□ 0.32
CAPN8A6NHC0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 PCDHA1-201ENST00000378133 2726 ntBASIC17.06■□□□□ 0.32
CAPN8A6NHC0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPN8A6NHC0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 CRYGEP-201ENST00000412192 528 ntBASIC17.05■□□□□ 0.32
CAPN8A6NHC0 MED15P5-201ENST00000423150 992 ntBASIC17.05■□□□□ 0.32
CAPN8A6NHC0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 AC107918.2-201ENST00000530817 355 ntBASIC17.05■□□□□ 0.32
CAPN8A6NHC0 AC010327.4-202ENST00000591484 748 ntBASIC17.05■□□□□ 0.32
CAPN8A6NHC0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.05■□□□□ 0.32
CAPN8A6NHC0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CAPN8A6NHC0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 AL021920.2-201ENST00000624828 1351 ntBASIC17.04■□□□□ 0.32
CAPN8A6NHC0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 HCG4B-203ENST00000450128 991 ntBASIC17.04■□□□□ 0.32
CAPN8A6NHC0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 AC092068.3-201ENST00000587894 2016 ntBASIC17.04■□□□□ 0.32
CAPN8A6NHC0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CAPN8A6NHC0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 TUBB8P12-201ENST00000308911 1335 ntBASIC17.03■□□□□ 0.32
CAPN8A6NHC0 TUBB7P-202ENST00000428444 1305 ntBASIC17.03■□□□□ 0.32
CAPN8A6NHC0 TUBB8P7-204ENST00000567960 1332 ntBASIC17.03■□□□□ 0.32
CAPN8A6NHC0 AC129492.6-201ENST00000611383 1305 ntBASIC17.03■□□□□ 0.32
CAPN8A6NHC0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN8A6NHC0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms