Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 DBET-201ENST00000630918 3363 ntBASIC17.84■□□□□ 0.45
RCCD1A6NED2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 AC104819.1-201ENST00000504587 486 ntBASIC17.84■□□□□ 0.45
RCCD1A6NED2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 MPDU1-223ENST00000582151 728 ntBASIC17.84■□□□□ 0.45
RCCD1A6NED2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RCCD1A6NED2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
RCCD1A6NED2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RCCD1A6NED2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RCCD1A6NED2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RCCD1A6NED2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RCCD1A6NED2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.83■□□□□ 0.45
RCCD1A6NED2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.83■□□□□ 0.45
RCCD1A6NED2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.83■□□□□ 0.45
RCCD1A6NED2 IER3-202ENST00000376377 1350 ntBASIC17.83■□□□□ 0.45
RCCD1A6NED2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RCCD1A6NED2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
RCCD1A6NED2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 RN7SL602P-201ENST00000578326 324 ntBASIC17.83■□□□□ 0.44
RCCD1A6NED2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 REXO1L3P-201ENST00000622202 1288 ntBASIC17.83■□□□□ 0.44
RCCD1A6NED2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RCCD1A6NED2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RCCD1A6NED2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 KRT8P39-201ENST00000396270 1433 ntBASIC17.82■□□□□ 0.44
RCCD1A6NED2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 AC126177.1-201ENST00000547829 2218 ntBASIC17.82■□□□□ 0.44
RCCD1A6NED2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 AC132008.2-207ENST00000454517 770 ntBASIC17.82■□□□□ 0.44
RCCD1A6NED2 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 AC012615.1-201ENST00000565797 1299 ntBASIC17.82■□□□□ 0.44
RCCD1A6NED2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.82■□□□□ 0.44
RCCD1A6NED2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RCCD1A6NED2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RCCD1A6NED2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RCCD1A6NED2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms