Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 GUSBP12-201ENST00000513727 720 ntBASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 AC124864.1-201ENST00000623408 392 ntBASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AC004817.3-201ENST00000602957 2129 ntBASIC14.63□□□□□ -0.07
SHISA3A0PJX4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AC112907.2-201ENST00000448639 330 ntBASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHISA3A0PJX4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AC097637.2-201ENST00000624096 1997 ntBASIC14.62□□□□□ -0.07
SHISA3A0PJX4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AC091607.1-201ENST00000490318 1060 ntBASIC14.62□□□□□ -0.07
SHISA3A0PJX4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AC145285.6-201ENST00000604632 637 ntBASIC14.62□□□□□ -0.07
SHISA3A0PJX4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHISA3A0PJX4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHISA3A0PJX4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms