Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 AC092850.2-201ENST00000623821 2697 ntBASIC14.49□□□□□ -0.09
TRAV18A0A075B6X5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 AP002414.2-201ENST00000591780 3365 ntBASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 RNF126P1-202ENST00000569893 925 ntBASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 AC011558.1-201ENST00000623459 338 ntBASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV18A0A075B6X5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AL021920.2-201ENST00000624828 1351 ntBASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AC003669.1-201ENST00000334569 611 ntBASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 LIN28AP1-201ENST00000429574 405 ntBASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 GUSBP12-201ENST00000513727 720 ntBASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 MIR600HG-201ENST00000449175 5984 ntBASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV18A0A075B6X5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms