Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 MTDHP4-201ENST00000600287 670 ntBASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
DDX49Q9Y6V7 AC007950.2-201ENST00000615045 2347 ntBASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 OR7E14P-202ENST00000530490 1290 ntBASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 AC092865.5-201ENST00000545435 363 ntBASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DDX49Q9Y6V7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 CYP2T1P-202ENST00000641596 2535 ntBASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 AC005104.2-201ENST00000427818 678 ntBASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 TERC-201ENST00000602385 541 ntBASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX49Q9Y6V7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.2■□□□□ 0.83
DDX49Q9Y6V7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms