Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSNK1G3Q9Y6M4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 AC080080.1-201ENST00000625121 2420 ntBASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 KRT8P49-201ENST00000604166 1432 ntBASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 AC055876.3-201ENST00000431496 288 ntBASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 KLF2P3-201ENST00000451977 1087 ntBASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 AC138649.4-201ENST00000612222 287 ntBASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 AC116353.5-201ENST00000638148 1699 ntBASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1G3Q9Y6M4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSNK1G3Q9Y6M4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CSNK1G3Q9Y6M4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 MIR346-201ENST00000362234 95 ntBASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 AC026150.2-201ENST00000564693 1156 ntBASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 AL390955.2-201ENST00000603032 514 ntBASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1G3Q9Y6M4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 MST1L-201ENST00000442552 2185 ntBASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 PCDHA12-202ENST00000613593 2588 ntBASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1G3Q9Y6M4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms