Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGB1Q9Y5G3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 AC109462.3-201ENST00000573934 613 ntBASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 AL138966.2-201ENST00000621997 464 ntBASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 AC010460.3-201ENST00000511359 1579 ntBASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PCDHGB1Q9Y5G3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 AC103564.2-201ENST00000432853 1299 ntBASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 AC093458.2-201ENST00000623150 629 ntBASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PCDHGB1Q9Y5G3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDHGB1Q9Y5G3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms