Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH22Q9UJ99 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH22Q9UJ99 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CDH22Q9UJ99 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH22Q9UJ99 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH22Q9UJ99 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 MRPS18AP1-201ENST00000414458 589 ntBASIC17.76■□□□□ 0.43
CDH22Q9UJ99 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 CRB3P1-201ENST00000449338 276 ntBASIC17.76■□□□□ 0.43
CDH22Q9UJ99 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH22Q9UJ99 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 AL512638.1-201ENST00000457493 794 ntBASIC17.75■□□□□ 0.43
CDH22Q9UJ99 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 AL158211.3-201ENST00000607385 239 ntBASIC17.75■□□□□ 0.43
CDH22Q9UJ99 AC022211.2-201ENST00000585075 2527 ntBASIC17.75■□□□□ 0.43
CDH22Q9UJ99 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.75■□□□□ 0.43
CDH22Q9UJ99 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 AC069120.2-201ENST00000524091 540 ntBASIC17.74■□□□□ 0.43
CDH22Q9UJ99 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH22Q9UJ99 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms