Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NECTIN3Q9NQS3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 RPL13AP23-201ENST00000480739 586 ntBASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 RPS15P9-201ENST00000494093 319 ntBASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NECTIN3Q9NQS3 AC116353.5-201ENST00000638148 1699 ntBASIC16.14■□□□□ 0.18
NECTIN3Q9NQS3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.14■□□□□ 0.18
NECTIN3Q9NQS3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NECTIN3Q9NQS3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 AC093525.9-201ENST00000624961 1746 ntBASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 AL022342.1-201ENST00000400363 863 ntBASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 UNC93B6-202ENST00000528242 690 ntBASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 AF228730.7-201ENST00000641842 219 ntBASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 AC008741.2-201ENST00000612792 3115 ntBASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NECTIN3Q9NQS3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NECTIN3Q9NQS3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms