Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 AC068472.1-201ENST00000474589 881 ntBASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SND1-IT1Q9HBX3 AC138969.2-201ENST00000532739 9932 ntBASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AC006538.1-201ENST00000567905 1585 ntBASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 IGHGP-201ENST00000390555 1178 ntBASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AP003733.1-201ENST00000491725 852 ntBASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AC140113.3-201ENST00000605663 199 ntBASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 AC097374.2-201ENST00000618617 1306 ntBASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SND1-IT1Q9HBX3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms