Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AL365203.3-201ENST00000609742 2057 ntBASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 RBM17P3-201ENST00000417687 1192 ntBASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 AC024909.3-201ENST00000611513 2257 ntBASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PACSIN1Q9BY11 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 GGT4P-201ENST00000623672 1708 ntBASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 FGFR3P6-201ENST00000457012 610 ntBASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 MIR4492-201ENST00000581627 80 ntBASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 AL589182.2-201ENST00000619332 1049 ntBASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 AC002310.6-201ENST00000624451 1377 ntBASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 AL031731.1-201ENST00000642131 2094 ntBASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PACSIN1Q9BY11 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 AC087163.2-201ENST00000457299 853 ntBASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 MPDU1-223ENST00000582151 728 ntBASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 REXO1L3P-201ENST00000622202 1288 ntBASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 AL355877.3-201ENST00000622820 899 ntBASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PACSIN1Q9BY11 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms