Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HDHD3Q9BSH5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 KRT18P21-201ENST00000515767 1272 ntBASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 AC243591.1-201ENST00000452967 1364 ntBASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDHD3Q9BSH5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 AC024909.3-201ENST00000611513 2257 ntBASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms