Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.79□□□□□ -0.36
VGLL1Q99990 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.79□□□□□ -0.36
VGLL1Q99990 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.79□□□□□ -0.36
VGLL1Q99990 CHCHD2P8-201ENST00000429873 447 ntBASIC12.79□□□□□ -0.36
VGLL1Q99990 BX276092.5-203ENST00000456199 560 ntBASIC12.79□□□□□ -0.36
VGLL1Q99990 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.79□□□□□ -0.36
VGLL1Q99990 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.79□□□□□ -0.36
VGLL1Q99990 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.79□□□□□ -0.36
VGLL1Q99990 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.79□□□□□ -0.36
VGLL1Q99990 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VGLL1Q99990 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.79□□□□□ -0.36
VGLL1Q99990 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VGLL1Q99990 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
VGLL1Q99990 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 AC148477.5-201ENST00000625164 1645 ntBASIC12.78□□□□□ -0.36
VGLL1Q99990 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VGLL1Q99990 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.78□□□□□ -0.36
VGLL1Q99990 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.78□□□□□ -0.36
VGLL1Q99990 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
VGLL1Q99990 AL121672.3-201ENST00000608644 468 ntBASIC12.78□□□□□ -0.36
VGLL1Q99990 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VGLL1Q99990 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VGLL1Q99990 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms