Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 HMGA1P7-201ENST00000406908 502 ntBASIC13.66□□□□□ -0.22
ZNF48Q96MX3 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.66□□□□□ -0.22
ZNF48Q96MX3 TFAMP1-201ENST00000412727 736 ntBASIC13.66□□□□□ -0.22
ZNF48Q96MX3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 BCRP1-201ENST00000444246 691 ntBASIC13.66□□□□□ -0.22
ZNF48Q96MX3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
ZNF48Q96MX3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AC005237.2-201ENST00000434368 219 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AL592309.1-201ENST00000443127 649 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AC079140.1-201ENST00000508039 487 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 FAM86C2P-203ENST00000528684 1004 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AC243562.1-201ENST00000560672 389 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 AC005498.2-205ENST00000593218 784 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.65□□□□□ -0.22
ZNF48Q96MX3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF48Q96MX3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms