Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
CCDC65Q8IXS2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC65Q8IXS2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.64■□□□□ 0.58
CCDC65Q8IXS2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC65Q8IXS2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.64■□□□□ 0.58
CCDC65Q8IXS2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.64■□□□□ 0.58
CCDC65Q8IXS2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 CYP2A7P1-201ENST00000595391 815 ntBASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC65Q8IXS2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 SNX33P1-201ENST00000592116 1762 ntBASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 VN2R19P-201ENST00000442399 1052 ntBASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 FAM185BP-201ENST00000443595 716 ntBASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 KRT8P39-201ENST00000396270 1433 ntBASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC65Q8IXS2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 CRYGEP-201ENST00000412192 528 ntBASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 CXCL1P1-201ENST00000502804 216 ntBASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC65Q8IXS2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC65Q8IXS2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms