Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 KRT18P38-201ENST00000449496 1282 ntBASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 AC023824.1-201ENST00000562945 2975 ntBASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AC132872.4-202ENST00000622924 2756 ntBASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 GUSBP12-201ENST00000513727 720 ntBASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM42Q8IWZ5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 AC067930.6-201ENST00000623257 4947 ntBASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 AC024909.3-201ENST00000611513 2257 ntBASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM42Q8IWZ5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 AL031133.1-201ENST00000406807 723 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms