Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 AL365203.3-201ENST00000609742 2057 ntBASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CRLF3Q8IUI8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CRLF3Q8IUI8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CRLF3Q8IUI8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 RN7SL606P-201ENST00000472779 293 ntBASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 AC012615.1-201ENST00000565797 1299 ntBASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 AL135999.2-201ENST00000622438 1686 ntBASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CRLF3Q8IUI8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AL049757.1-201ENST00000616842 1596 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AC233702.3-201ENST00000578656 1387 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AC103564.2-201ENST00000432853 1299 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 NUS1P1-201ENST00000446295 882 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AC122714.2-201ENST00000502787 707 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AC104819.1-201ENST00000504587 486 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 STK25P1-201ENST00000585406 838 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AL691432.3-201ENST00000621860 400 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AC068587.6-202ENST00000641839 5619 ntBASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.82■□□□□ 0.28
CRLF3Q8IUI8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.81■□□□□ 0.28
CRLF3Q8IUI8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CRLF3Q8IUI8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms