Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
LDB1Q86U70 SLC22A20-204ENST00000530038 1673 ntBASIC16.78■□□□□ 0.28
LDB1Q86U70 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.78■□□□□ 0.28
LDB1Q86U70 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB1Q86U70 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LDB1Q86U70 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 SNX33P1-201ENST00000592116 1762 ntBASIC16.77■□□□□ 0.28
LDB1Q86U70 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 RPS2P28-201ENST00000314255 741 ntBASIC16.77■□□□□ 0.28
LDB1Q86U70 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.77■□□□□ 0.28
LDB1Q86U70 AC108073.2-201ENST00000464002 357 ntBASIC16.77■□□□□ 0.28
LDB1Q86U70 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.77■□□□□ 0.28
LDB1Q86U70 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LDB1Q86U70 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.77■□□□□ 0.28
LDB1Q86U70 OR7E47P-204ENST00000575924 449 ntBASIC16.77■□□□□ 0.28
LDB1Q86U70 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.77■□□□□ 0.28
LDB1Q86U70 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LDB1Q86U70 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LDB1Q86U70 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB1Q86U70 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB1Q86U70 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB1Q86U70 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB1Q86U70 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB1Q86U70 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.77■□□□□ 0.27
LDB1Q86U70 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.77■□□□□ 0.27
LDB1Q86U70 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LDB1Q86U70 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.76■□□□□ 0.27
LDB1Q86U70 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 AC098831.1-202ENST00000438821 336 ntBASIC16.76■□□□□ 0.27
LDB1Q86U70 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.76■□□□□ 0.27
LDB1Q86U70 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.76■□□□□ 0.27
LDB1Q86U70 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 GGTLC5P-201ENST00000617623 998 ntBASIC16.76■□□□□ 0.27
LDB1Q86U70 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LDB1Q86U70 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.76■□□□□ 0.27
LDB1Q86U70 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LDB1Q86U70 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LDB1Q86U70 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB1Q86U70 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB1Q86U70 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms