Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.57■□□□□ 0.08
TUBA1AQ71U36 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 AC125634.1-201ENST00000438758 1403 ntBASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TUBA1AQ71U36 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 AC126177.1-201ENST00000547829 2218 ntBASIC15.56■□□□□ 0.08
TUBA1AQ71U36 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 AL138831.2-201ENST00000606564 490 ntBASIC15.56■□□□□ 0.08
TUBA1AQ71U36 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.56■□□□□ 0.08
TUBA1AQ71U36 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 AC079328.2-201ENST00000561241 3354 ntBASIC15.55■□□□□ 0.08
TUBA1AQ71U36 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 TP73-AS1-210ENST00000637775 1455 ntBASIC15.55■□□□□ 0.08
TUBA1AQ71U36 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TUBA1AQ71U36 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms