Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 AC074386.1-202ENST00000463561 864 ntBASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 AC068137.2-201ENST00000605408 478 ntBASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TTC41PQ6P2S7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 AP000347.1-202ENST00000435868 847 ntBASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 AC040169.1-201ENST00000565382 521 ntBASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.33■□□□□ 0.85
TTC41PQ6P2S7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.33■□□□□ 0.84
TTC41PQ6P2S7 ALOX12P2-203ENST00000570921 1945 ntBASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AC092474.2-201ENST00000424288 719 ntBASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AC020765.3-201ENST00000613051 740 ntBASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 AC092919.2-201ENST00000623631 1645 ntBASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TTC41PQ6P2S7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 POLD2P1-201ENST00000511220 997 ntBASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TTC41PQ6P2S7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms