Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 PTK7-212ENST00000476760 902 ntTSL 2 BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC24.98■■□□□ 1.59
CDC42BPAQ5VT25 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 AL645728.1-201ENST00000366221 2101 ntBASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 AC020765.3-201ENST00000613051 740 ntBASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 AC060834.1-201ENST00000443027 2032 ntBASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CDC42BPAQ5VT25 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 RELA-227ENST00000615805 2236 ntTSL 5 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDC42BPAQ5VT25 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 EEF1DP4-201ENST00000446006 880 ntBASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 MIR6805-201ENST00000615055 62 ntBASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 AL162274.1-201ENST00000617191 1098 ntBASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CDC42BPAQ5VT25 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 AC025048.3-201ENST00000590609 569 ntBASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 AC005702.4-201ENST00000618393 416 ntBASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 AL033527.4-201ENST00000641026 673 ntBASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 AC068880.1-201ENST00000507289 2297 ntBASIC24.95■■□□□ 1.58
CDC42BPAQ5VT25 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 AC022494.1-201ENST00000466044 728 ntBASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 AP002490.2-201ENST00000524791 560 ntBASIC24.94■■□□□ 1.58
CDC42BPAQ5VT25 AC123567.1-201ENST00000548294 1261 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms