Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 AC003669.1-201ENST00000334569 611 ntBASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 RBM17P3-201ENST00000417687 1192 ntBASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 DUSP5P1-201ENST00000441325 1139 ntBASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 AL139327.4-201ENST00000612362 153 ntBASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 AP005117.1-201ENST00000584346 1413 ntBASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATPAF1Q5TC12 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC073592.5-201ENST00000624854 528 ntBASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ATPAF1Q5TC12 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms