Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN20Q4JDL3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AC140113.2-201ENST00000604370 208 ntBASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AL645728.2-201ENST00000641974 660 ntBASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 GGT3P-204ENST00000453783 1664 ntBASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AC005052.1-201ENST00000625181 2492 ntBASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN20Q4JDL3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 AL031432.2-201ENST00000566714 459 ntBASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 AL928711.1-201ENST00000570165 459 ntBASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN20Q4JDL3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN20Q4JDL3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms