Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.3□□□□□ -0.12
EFNB3Q15768 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EFNB3Q15768 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EFNB3Q15768 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.29□□□□□ -0.12
EFNB3Q15768 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EFNB3Q15768 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
EFNB3Q15768 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EFNB3Q15768 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EFNB3Q15768 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 AL627223.1-201ENST00000416693 442 ntBASIC14.29□□□□□ -0.12
EFNB3Q15768 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.29□□□□□ -0.12
EFNB3Q15768 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.29□□□□□ -0.12
EFNB3Q15768 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 AL592309.1-201ENST00000443127 649 ntBASIC14.29□□□□□ -0.12
EFNB3Q15768 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 HLA-J-203ENST00000494367 1087 ntBASIC14.29□□□□□ -0.12
EFNB3Q15768 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
EFNB3Q15768 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
EFNB3Q15768 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 KRT8P23-201ENST00000560090 1207 ntBASIC14.29□□□□□ -0.12
EFNB3Q15768 AC243562.1-201ENST00000560672 389 ntBASIC14.29□□□□□ -0.12
EFNB3Q15768 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.29□□□□□ -0.12
EFNB3Q15768 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.29□□□□□ -0.12
EFNB3Q15768 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.29□□□□□ -0.12
EFNB3Q15768 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EFNB3Q15768 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
EFNB3Q15768 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
EFNB3Q15768 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.29□□□□□ -0.12
EFNB3Q15768 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EFNB3Q15768 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.28□□□□□ -0.12
EFNB3Q15768 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.28□□□□□ -0.12
EFNB3Q15768 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.28□□□□□ -0.12
EFNB3Q15768 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 AC027796.2-201ENST00000575326 344 ntBASIC14.28□□□□□ -0.12
EFNB3Q15768 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.28□□□□□ -0.12
EFNB3Q15768 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 AC009093.7-201ENST00000623853 1223 ntBASIC14.28□□□□□ -0.12
EFNB3Q15768 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EFNB3Q15768 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EFNB3Q15768 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.28□□□□□ -0.12
EFNB3Q15768 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms