Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
IRX3P78415 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 AC015922.1-201ENST00000421102 1152 ntBASIC19.54■□□□□ 0.72
IRX3P78415 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.54■□□□□ 0.72
IRX3P78415 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.54■□□□□ 0.72
IRX3P78415 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 AC084121.4-201ENST00000641598 221 ntBASIC19.54■□□□□ 0.72
IRX3P78415 AF228730.8-201ENST00000642140 221 ntBASIC19.54■□□□□ 0.72
IRX3P78415 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.54■□□□□ 0.72
IRX3P78415 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 AL355312.1-201ENST00000407115 2176 ntBASIC19.54■□□□□ 0.72
IRX3P78415 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
IRX3P78415 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.54■□□□□ 0.72
IRX3P78415 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 BICD1-207ENST00000551848 1962 ntBASIC19.53■□□□□ 0.72
IRX3P78415 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
IRX3P78415 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
IRX3P78415 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
IRX3P78415 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
IRX3P78415 RNU1-129P-201ENST00000384064 167 ntBASIC19.53■□□□□ 0.72
IRX3P78415 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.53■□□□□ 0.72
IRX3P78415 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.53■□□□□ 0.72
IRX3P78415 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
IRX3P78415 U1.21-201ENST00000580816 167 ntBASIC19.53■□□□□ 0.72
IRX3P78415 RN7SL204P-201ENST00000582831 262 ntBASIC19.53■□□□□ 0.72
IRX3P78415 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.53■□□□□ 0.72
IRX3P78415 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
IRX3P78415 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.53■□□□□ 0.72
IRX3P78415 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.53■□□□□ 0.72
IRX3P78415 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
IRX3P78415 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.53■□□□□ 0.72
IRX3P78415 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IRX3P78415 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
IRX3P78415 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX3P78415 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.52■□□□□ 0.72
IRX3P78415 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX3P78415 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX3P78415 AL512638.1-201ENST00000457493 794 ntBASIC19.52■□□□□ 0.72
IRX3P78415 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
IRX3P78415 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX3P78415 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.52■□□□□ 0.72
IRX3P78415 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.52■□□□□ 0.72
IRX3P78415 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.52■□□□□ 0.72
IRX3P78415 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.52■□□□□ 0.72
IRX3P78415 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
IRX3P78415 AC091167.2-201ENST00000579581 588 ntBASIC19.52■□□□□ 0.72
IRX3P78415 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.52■□□□□ 0.72
IRX3P78415 AC008267.7-201ENST00000624570 1194 ntBASIC19.52■□□□□ 0.72
IRX3P78415 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.52■□□□□ 0.72
IRX3P78415 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IRX3P78415 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
IRX3P78415 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
IRX3P78415 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
IRX3P78415 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.52■□□□□ 0.71
IRX3P78415 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
IRX3P78415 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.52■□□□□ 0.71
IRX3P78415 AC133963.1-201ENST00000504166 1679 ntBASIC19.52■□□□□ 0.71
IRX3P78415 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
IRX3P78415 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
IRX3P78415 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
IRX3P78415 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
IRX3P78415 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.52■□□□□ 0.71
IRX3P78415 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
IRX3P78415 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IRX3P78415 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms