Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC092364.2-202ENST00000597012 1073 ntBASIC17.53■□□□□ 0.4
IRX4P78413 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.53■□□□□ 0.4
IRX4P78413 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.53■□□□□ 0.4
IRX4P78413 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 LYSMD4-203ENST00000378904 2122 ntBASIC17.53■□□□□ 0.4
IRX4P78413 AC002310.6-201ENST00000624451 1377 ntBASIC17.53■□□□□ 0.4
IRX4P78413 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IRX4P78413 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
IRX4P78413 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
IRX4P78413 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.52■□□□□ 0.4
IRX4P78413 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.52■□□□□ 0.4
IRX4P78413 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IRX4P78413 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
IRX4P78413 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.52■□□□□ 0.4
IRX4P78413 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.52■□□□□ 0.4
IRX4P78413 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
IRX4P78413 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.52■□□□□ 0.4
IRX4P78413 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
IRX4P78413 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.52■□□□□ 0.4
IRX4P78413 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.52■□□□□ 0.4
IRX4P78413 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
IRX4P78413 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.52■□□□□ 0.4
IRX4P78413 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.52■□□□□ 0.4
IRX4P78413 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.52■□□□□ 0.4
IRX4P78413 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IRX4P78413 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.52■□□□□ 0.39
IRX4P78413 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
IRX4P78413 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX4P78413 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX4P78413 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IRX4P78413 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 AGGF1P2-201ENST00000426656 2106 ntBASIC17.51■□□□□ 0.39
IRX4P78413 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IRX4P78413 AC046158.3-201ENST00000624947 2558 ntBASIC17.51■□□□□ 0.39
IRX4P78413 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 CRYGEP-201ENST00000412192 528 ntBASIC17.51■□□□□ 0.39
IRX4P78413 CNN2P11-201ENST00000429351 262 ntBASIC17.51■□□□□ 0.39
IRX4P78413 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.51■□□□□ 0.39
IRX4P78413 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IRX4P78413 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 AC073592.4-201ENST00000623827 446 ntBASIC17.51■□□□□ 0.39
IRX4P78413 C20orf181-201ENST00000623918 480 ntBASIC17.51■□□□□ 0.39
IRX4P78413 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IRX4P78413 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IRX4P78413 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.51■□□□□ 0.39
IRX4P78413 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
IRX4P78413 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms