Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.41■□□□□ 0.06
CDC42P60953 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.41■□□□□ 0.06
CDC42P60953 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.41■□□□□ 0.06
CDC42P60953 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 AC011558.1-201ENST00000623459 338 ntBASIC15.41■□□□□ 0.06
CDC42P60953 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.41■□□□□ 0.06
CDC42P60953 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 AC005052.1-201ENST00000625181 2492 ntBASIC15.41■□□□□ 0.06
CDC42P60953 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.41■□□□□ 0.06
CDC42P60953 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDC42P60953 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.41■□□□□ 0.06
CDC42P60953 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.4■□□□□ 0.06
CDC42P60953 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDC42P60953 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDC42P60953 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.4■□□□□ 0.06
CDC42P60953 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.4■□□□□ 0.06
CDC42P60953 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 AC066615.1-201ENST00000640911 628 ntBASIC15.4■□□□□ 0.06
CDC42P60953 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
CDC42P60953 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDC42P60953 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 AL596087.1-201ENST00000400979 1969 ntBASIC15.4■□□□□ 0.06
CDC42P60953 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDC42P60953 AC104640.1-201ENST00000562617 2109 ntBASIC15.4■□□□□ 0.06
CDC42P60953 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC42P60953 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC42P60953 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms