Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC1A6P48664 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC1A6P48664 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC1A6P48664 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC1A6P48664 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC1A6P48664 AC063952.2-201ENST00000498792 1227 ntBASIC16.56■□□□□ 0.24
SLC1A6P48664 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SLC1A6P48664 AC093827.2-201ENST00000512654 315 ntBASIC16.56■□□□□ 0.24
SLC1A6P48664 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC1A6P48664 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC1A6P48664 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC1A6P48664 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC1A6P48664 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC1A6P48664 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC1A6P48664 AC097637.2-201ENST00000624096 1997 ntBASIC16.56■□□□□ 0.24
SLC1A6P48664 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SLC1A6P48664 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC1A6P48664 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC1A6P48664 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC1A6P48664 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC1A6P48664 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
SLC1A6P48664 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC1A6P48664 AL603832.2-201ENST00000566195 2125 ntBASIC16.55■□□□□ 0.24
SLC1A6P48664 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC1A6P48664 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC1A6P48664 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 AP005901.3-202ENST00000581653 237 ntBASIC16.55■□□□□ 0.24
SLC1A6P48664 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC1A6P48664 GGT3P-204ENST00000453783 1664 ntBASIC16.55■□□□□ 0.24
SLC1A6P48664 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC1A6P48664 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC1A6P48664 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC1A6P48664 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SLC1A6P48664 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SLC1A6P48664 AC004817.3-201ENST00000602957 2129 ntBASIC16.54■□□□□ 0.24
SLC1A6P48664 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC1A6P48664 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.54■□□□□ 0.24
SLC1A6P48664 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SLC1A6P48664 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
SLC1A6P48664 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
SLC1A6P48664 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.54■□□□□ 0.24
SLC1A6P48664 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 INTS4P1-201ENST00000438455 1935 ntBASIC16.54■□□□□ 0.24
SLC1A6P48664 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.54■□□□□ 0.24
SLC1A6P48664 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.54■□□□□ 0.24
SLC1A6P48664 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SLC1A6P48664 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms